Reorganised the code into a PyPI package format

Sample codes/Analyse_folders_and_description.ipynb

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+{
+ "cells": [
+  {
+   "cell_type": "markdown",
+   "id": "abstract-broad",
+   "metadata": {},
+   "source": [
+    "# Program to read through folders in a file-path and spit out description"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "id": "similar-algeria",
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "def find_algorithm():\n",
+    "    import os # To enable you walk through the OS directory\n",
+    "    import re # To enable pattern recognition\n",
+    "    \n",
+    "    \n",
+    "    # Take file-path and extract names of files in file-path as list data type\n",
+    "    check_folder = input(\"Please enter the file-path of the folder: \\n\")\n",
+    "    found_items = os.listdir(check_folder)\n",
+    "    \n",
+    "    \n",
+    "    # Initialize what the pattern to be searched for should look like\n",
+    "    pattern = \"\\W\\W\\W\"\n",
+    "    \n",
+    "    # Look into the individual txt files and extraxt the description \n",
+    "    for items in range(0, len(found_items)):\n",
+    "        print(f\"\\n({items + 1}): I found the file named: {found_items[items]}\")\n",
+    "        inside_file = check_folder + '\\\\' + found_items[items]\n",
+    "        \n",
+    "        with open(inside_file, mode ='r', encoding = 'utf-8') as myfile:\n",
+    "            print(\"Inside the file, I found this description: \\n \")\n",
+    "            contents = myfile.readlines()\n",
+    "            \n",
+    "            for indexing in range(0, len(contents)):\n",
+    "                if re.search(pattern, contents[indexing]):\n",
+    "                    print(contents[indexing+1])\n",
+    "                    break\n",
+    "                    \n",
+    "            print(\"\\n\\n\")"
+   ]
+  }
+ ],
+ "metadata": {
+  "kernelspec": {
+   "display_name": "Python 3",
+   "language": "python",
+   "name": "python3"
+  },
+  "language_info": {
+   "codemirror_mode": {
+    "name": "ipython",
+    "version": 3
+   },
+   "file_extension": ".py",
+   "mimetype": "text/x-python",
+   "name": "python",
+   "nbconvert_exporter": "python",
+   "pygments_lexer": "ipython3",
+   "version": "3.9.2"
+  }
+ },
+ "nbformat": 4,
+ "nbformat_minor": 5
+}

Sample codes/Testingground.py

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+from mpl_toolkits.mplot3d import Axes3D
+import matplotlib.pyplot as plt
+from matplotlib import cm
+from matplotlib.ticker import LinearLocator, FormatStrFormatter
+import numpy as np
+
+
+fig = plt.figure()
+ax = fig.gca(projection='3d')
+
+# Make data.
+X = np.arange(-5, 5, 0.25)
+Y = np.arange(-5, 5, 0.25)
+X, Y = np.meshgrid(X, Y)
+R = np.sqrt(X**2 + Y**2)
+Z = np.sin(R)
+print(Z[1])
+
+# Plot the surface.
+surf = ax.plot_surface(X, Y, Z, cmap=cm.coolwarm,
+                       linewidth=0, antialiased=False)
+
+# Customize the z axis.
+ax.set_zlim(-1.01, 1.01)
+ax.zaxis.set_major_locator(LinearLocator(10))
+ax.zaxis.set_major_formatter(FormatStrFormatter('%.02f'))
+
+# Add a color bar which maps values to colors.
+fig.colorbar(surf, shrink=0.5, aspect=5)
+
+plt.show()

Sample codes/calcFeatures.R

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+library(reticulate)
+library(flacco)
+library(parallelMap)
+library(parallel)
+
+# Other packages to install
+# plyr
+# RANN
+# numDeriv
+# e1071
+# mda - needs to install gcc-fortran on Operating system
+
+
+genTestFeatures <- function(path,pypath, upper=10, lower=-10, n) {
+    
+    use_python(pypath)
+    source_python(path)
+    
+    X = createInitialSample(n.obs = 500, dim = n, control = list(init_sample.type = 'lhs', init_sample.lower = lower, init_sample.upper = upper))
+    
+    y = apply(X, 1, main)
+    
+    testfunc <- createFeatureObject(X = X, y = y, fun = main, lower = lower, upper = upper, blocks = 10)
+    
+    n.cores = detectCores()
+    parallelStart(mode = "local", logging = FALSE, show.info = FALSE)
+    system.time((levelset.par = calculateFeatures(testfunc , control = list('cm_angle.show_warnings'=TRUE, 'cm_grad.show_warnings'=TRUE, 'ic.show_warnings'=TRUE))))
+    parallelStop()
+    
+    
+}